STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HYLS1HYLS1 centriolar and ciliogenesis associated. (313 aa)    
Predicted Functional Partners:
SCLT1
Sodium channel and clathrin linker 1.
      
 0.696
C2CD3
C2 domain containing 3 centriole elongation regulator.
      
 0.679
LOC100344427
Uncharacterized protein.
      
 0.679
B9D1
B9 domain containing 1.
      
 0.615
DDX25
DEAD-box helicase 25.
      
 0.552
CEP164
Centrosomal protein 164.
      
 0.497
PKNOX2
PBX/knotted 1 homeobox 2.
      
 0.495
CEP89
Centrosomal protein 89.
   
  
 0.482
IFT140
Intraflagellar transport 140.
      
 0.476
CEP83
Centrosomal protein 83.
   
  
 0.472
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.