STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TACC1Transforming acidic coiled-coil containing protein 1. (774 aa)    
Predicted Functional Partners:
CKAP5
Cytoskeleton associated protein 5.
   
 
 0.734
CCDC125
Coiled-coil domain containing 125.
      
 0.664
G1U8F7_RABIT
Uncharacterized protein.
 
  
 
 0.657
FGFR1
Fibroblast growth factor receptor.
    
 0.650
TACC2
TACC_C domain-containing protein.
    
 
0.611
CLASP1
Cytoplasmic linker associated protein 1.
      
 0.563
AHCYL1
Adenosylhomocysteinase like 1; Belongs to the adenosylhomocysteinase family.
   
  
 0.561
BAIAP2L1
BAI1 associated protein 2 like 1.
   
 0.541
UBE2D4
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  
 0.530
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.510
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.