STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHM2Pleckstrin homology and RUN domain containing M2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (1157 aa)    
Predicted Functional Partners:
AASDH
Aminoadipate-semialdehyde dehydrogenase.
   
 
 0.873
ULK1
Unc-51 like autophagy activating kinase 1.
    
 
 0.671
ULK2
Unc-51 like autophagy activating kinase 2.
    
 
 0.671
STK35
Serine/threonine kinase 35.
    
 
 0.445
PDIK1L
PDLIM1 interacting kinase 1 like; Belongs to the protein kinase superfamily.
    
 
 0.445
ULK3
Unc-51 like kinase 3.
    
 
 0.445
ARL5B
ADP ribosylation factor like GTPase 5B; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.444
KIF5B
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.442
TRIT1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
   
  
 0.428
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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