STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM82Transmembrane protein 82. (344 aa)    
Predicted Functional Partners:
FAM131C
Family with sequence similarity 131 member C.
  
   
 0.872
FBLIM1
Filamin binding LIM protein 1.
 
    
 0.790
ZBTB17
Zinc finger and BTB domain containing 17.
      
 0.741
CLCNKA
Chloride channel protein ClC-Ka; Voltage-gated chloride channel. Chloride channels have several functions including the regulation of cell volume; membrane potential stabilization, signal transduction and transepithelial transport. May be important in urinary concentrating mechanisms; Belongs to the chloride channel (TC 2.A.49) family. CLCNKA subfamily.
      
 0.680
HSPB7
Heat shock protein family B (small) member 7; Belongs to the small heat shock protein (HSP20) family.
      
 0.649
SPEN
Spen family transcriptional repressor.
      
 0.649
SPATA3
Spermatogenesis associated 3.
      
 0.622
NTAN1
N-terminal asparagine amidase.
      
 0.576
CEP78
Centrosomal protein 78.
      
 0.550
SH3BP4
SH3 domain binding protein 4.
      
 0.548
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.