STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1SMA6_RABITAlpha-mannosidase. (1016 aa)    
Predicted Functional Partners:
HEXA
Beta-hexosaminidase.
   
 
 0.685
HEXB
Beta-hexosaminidase.
   
 
 0.679
CTBS
Chitobiase; Belongs to the glycosyl hydrolase 18 family.
      
 0.673
MANBA
Mannosidase beta.
   
 
 0.631
CPQ
Carboxypeptidase Q.
      
 0.559
ENSOCUP00000049670
Alpha-galactosidase.
   
 
 0.543
CD1B
T-cell surface glycoprotein CD1b; Antigen-presenting protein that binds self and non-self lipid and glycolipid antigens and presents them to T-cell receptors on natural killer T-cells.
    
 
 0.541
GUSB
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
   
 
 0.534
GLA
Alpha-galactosidase.
   
 
 0.528
NAGA
Alpha-galactosidase.
   
 
 0.506
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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