STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLFM2Olfactomedin 2. (467 aa)    
Predicted Functional Partners:
UBL5
Ubiquitin like 5.
      
 0.775
OCIAD2
OCIA domain containing 2.
      
 0.648
COL5A3
Collagen type V alpha 3 chain.
   
  
 0.601
FBXL12
F-box and leucine rich repeat protein 12.
      
 0.575
EPHX4
Epoxide hydrolase 4.
   
  
 0.573
NYNRIN
NYN domain and retroviral integrase containing.
      
 0.545
SH3RF1
SH3 domain containing ring finger 1.
      
 0.540
MPPED1
Metallophosphoesterase domain containing 1.
   
  
 0.534
SH3BGR
SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family.
      
 0.509
RBM23
RNA binding motif protein 23.
      
 0.465
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.