STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCA2Chloride channel accessory 2. (940 aa)    
Predicted Functional Partners:
NCKAP5L
NCK associated protein 5 like.
      
 0.723
CLIC5
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.636
ANO2
Anoctamin.
   
  
 0.627
SLC17A8
Solute carrier family 17 member 8.
   
  
 0.625
CLCN6
Chloride transport protein 6; Chloride transport protein, initially identified as voltage- gated chloride channel. The presence of the conserved gating glutamate residues suggests that is functions as antiporter (By similarity). Belongs to the chloride channel (TC 2.A.49) family. ClC- 6/CLCN6 subfamily.
   
 
 0.584
GLYATL3
Glycine-N-acyltransferase like 3.
   
  
 0.583
RPS6KL1
Ribosomal protein S6 kinase like 1.
    
 0.576
TTC17
Tetratricopeptide repeat domain 17.
   
  
 0.572
FAM174A
Family with sequence similarity 174 member A.
   
  
 0.569
GRAMD2B
GRAM domain containing 2B.
    
 
 0.561
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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