SNX10 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SNX10

Sorting nexin 10. (117 aa)

Predicted Functional Partners:

VPS35

0.888

VPS26B

0.819

VPS26A

0.802

PLEKHM1

0.712

VPS29

0.710

SNX1

0.620

OSTM1

0.615

HS1BP3

0.607

WLS

0.602

ZSCAN26

0.590

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HS1BP3	SNX10	ENSOCUP00000013558	ENSOCUP00000004098	HCLS1 binding protein 3.	Sorting nexin 10.	0.607
OSTM1	PLEKHM1	ENSOCUP00000013815	ENSOCUP00000007396	Uncharacterized protein.	Pleckstrin homology and RUN domain containing M1.	0.808
OSTM1	SNX10	ENSOCUP00000013815	ENSOCUP00000004098	Uncharacterized protein.	Sorting nexin 10.	0.615
PLEKHM1	OSTM1	ENSOCUP00000007396	ENSOCUP00000013815	Pleckstrin homology and RUN domain containing M1.	Uncharacterized protein.	0.808
PLEKHM1	SNX10	ENSOCUP00000007396	ENSOCUP00000004098	Pleckstrin homology and RUN domain containing M1.	Sorting nexin 10.	0.712
SNX1	SNX10	ENSOCUP00000033265	ENSOCUP00000004098	Sorting nexin 1.	Sorting nexin 10.	0.620
SNX1	VPS26A	ENSOCUP00000033265	ENSOCUP00000018005	Sorting nexin 1.	VPS26, retromer complex component A.	0.971
SNX1	VPS26B	ENSOCUP00000033265	ENSOCUP00000010594	Sorting nexin 1.	VPS26, retromer complex component B.	0.947
SNX1	VPS29	ENSOCUP00000033265	ENSOCUP00000032959	Sorting nexin 1.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.997
SNX1	VPS35	ENSOCUP00000033265	ENSOCUP00000009037	Sorting nexin 1.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.997
SNX1	WLS	ENSOCUP00000033265	ENSOCUP00000036042	Sorting nexin 1.	Wnt ligand secretion mediator.	0.421
SNX10	HS1BP3	ENSOCUP00000004098	ENSOCUP00000013558	Sorting nexin 10.	HCLS1 binding protein 3.	0.607
SNX10	OSTM1	ENSOCUP00000004098	ENSOCUP00000013815	Sorting nexin 10.	Uncharacterized protein.	0.615
SNX10	PLEKHM1	ENSOCUP00000004098	ENSOCUP00000007396	Sorting nexin 10.	Pleckstrin homology and RUN domain containing M1.	0.712
SNX10	SNX1	ENSOCUP00000004098	ENSOCUP00000033265	Sorting nexin 10.	Sorting nexin 1.	0.620
SNX10	VPS26A	ENSOCUP00000004098	ENSOCUP00000018005	Sorting nexin 10.	VPS26, retromer complex component A.	0.802
SNX10	VPS26B	ENSOCUP00000004098	ENSOCUP00000010594	Sorting nexin 10.	VPS26, retromer complex component B.	0.819
SNX10	VPS29	ENSOCUP00000004098	ENSOCUP00000032959	Sorting nexin 10.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.710
SNX10	VPS35	ENSOCUP00000004098	ENSOCUP00000009037	Sorting nexin 10.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.888
SNX10	WLS	ENSOCUP00000004098	ENSOCUP00000036042	Sorting nexin 10.	Wnt ligand secretion mediator.	0.602