Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX58 | ENSOCUP00000030467 | ENSOCUP00000019472 | ENSOCUP00000030467 | DExD/H-box helicase 58. | Uncharacterized protein. | 0.687 |
DDX58 | UBB | ENSOCUP00000019472 | ENSOCUP00000001111 | DExD/H-box helicase 58. | Ubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11- [...] | 0.687 |
DDX58 | USP25 | ENSOCUP00000019472 | ENSOCUP00000004100 | DExD/H-box helicase 58. | Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family. | 0.754 |
ENSOCUP00000030467 | DDX58 | ENSOCUP00000030467 | ENSOCUP00000019472 | Uncharacterized protein. | DExD/H-box helicase 58. | 0.687 |
ENSOCUP00000030467 | TRIP12 | ENSOCUP00000030467 | ENSOCUP00000034286 | Uncharacterized protein. | Thyroid hormone receptor interactor 12. | 0.879 |
ENSOCUP00000030467 | USP13 | ENSOCUP00000030467 | ENSOCUP00000005236 | Uncharacterized protein. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.866 |
ENSOCUP00000030467 | USP14 | ENSOCUP00000030467 | ENSOCUP00000048678 | Uncharacterized protein. | Ubiquitin carboxyl-terminal hydrolase 14; Proteasome-associated deubiquitinase which releases ubiquitin from the proteasome targeted ubiquitinated proteins. Ensures the regeneration of ubiquitin at the proteasome. Is a reversibly associated subunit of the proteasome and a large fraction of proteasome-free protein exists within the cell. Required for the degradation of the chemokine receptor CXCR4 which is critical for CXCL12-induced cell chemotaxis. Serves also as a physiological inhibitor of endoplasmic reticulum-associated degradation (ERAD) under the non-stressed condition by inhibi [...] | 0.937 |
ENSOCUP00000030467 | USP25 | ENSOCUP00000030467 | ENSOCUP00000004100 | Uncharacterized protein. | Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family. | 0.718 |
ENSOCUP00000030467 | USP40 | ENSOCUP00000030467 | ENSOCUP00000001630 | Uncharacterized protein. | Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family. | 0.785 |
ENSOCUP00000030467 | USP5 | ENSOCUP00000030467 | ENSOCUP00000035741 | Uncharacterized protein. | Ubiquitinyl hydrolase 1. | 0.903 |
ENSOCUP00000030467 | YOD1 | ENSOCUP00000030467 | ENSOCUP00000012332 | Uncharacterized protein. | YOD1 deubiquitinase. | 0.829 |
TRIP12 | ENSOCUP00000030467 | ENSOCUP00000034286 | ENSOCUP00000030467 | Thyroid hormone receptor interactor 12. | Uncharacterized protein. | 0.879 |
TRIP12 | UBB | ENSOCUP00000034286 | ENSOCUP00000001111 | Thyroid hormone receptor interactor 12. | Ubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11- [...] | 0.879 |
TRIP12 | USP14 | ENSOCUP00000034286 | ENSOCUP00000048678 | Thyroid hormone receptor interactor 12. | Ubiquitin carboxyl-terminal hydrolase 14; Proteasome-associated deubiquitinase which releases ubiquitin from the proteasome targeted ubiquitinated proteins. Ensures the regeneration of ubiquitin at the proteasome. Is a reversibly associated subunit of the proteasome and a large fraction of proteasome-free protein exists within the cell. Required for the degradation of the chemokine receptor CXCR4 which is critical for CXCL12-induced cell chemotaxis. Serves also as a physiological inhibitor of endoplasmic reticulum-associated degradation (ERAD) under the non-stressed condition by inhibi [...] | 0.712 |
TRIP12 | USP25 | ENSOCUP00000034286 | ENSOCUP00000004100 | Thyroid hormone receptor interactor 12. | Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family. | 0.741 |
TRIP12 | USP40 | ENSOCUP00000034286 | ENSOCUP00000001630 | Thyroid hormone receptor interactor 12. | Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family. | 0.740 |
UBB | DDX58 | ENSOCUP00000001111 | ENSOCUP00000019472 | Ubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11- [...] | DExD/H-box helicase 58. | 0.687 |
UBB | TRIP12 | ENSOCUP00000001111 | ENSOCUP00000034286 | Ubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11- [...] | Thyroid hormone receptor interactor 12. | 0.879 |
UBB | USP13 | ENSOCUP00000001111 | ENSOCUP00000005236 | Ubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11- [...] | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.866 |
UBB | USP14 | ENSOCUP00000001111 | ENSOCUP00000048678 | Ubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11- [...] | Ubiquitin carboxyl-terminal hydrolase 14; Proteasome-associated deubiquitinase which releases ubiquitin from the proteasome targeted ubiquitinated proteins. Ensures the regeneration of ubiquitin at the proteasome. Is a reversibly associated subunit of the proteasome and a large fraction of proteasome-free protein exists within the cell. Required for the degradation of the chemokine receptor CXCR4 which is critical for CXCL12-induced cell chemotaxis. Serves also as a physiological inhibitor of endoplasmic reticulum-associated degradation (ERAD) under the non-stressed condition by inhibi [...] | 0.937 |
page 1 of 4