Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA16Spermatogenesis associated 16. (592 aa)    
Predicted Functional Partners:
RDH11
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
    0.994
DPY19L2
Dpy-19 like 2.
   
  
 0.906
C7orf61
Chromosome 7 open reading frame 61.
      
 0.877
CCDC62
Coiled-coil domain containing 62.
   
  
 0.874
PICK1
Protein interacting with PRKCA 1.
      
 0.825
SPATA9
Spermatogenesis associated 9.
      
 0.810
SPACA1
Sperm acrosome associated 1.
      
 0.770
AURKC
Aurora kinase C; Belongs to the protein kinase superfamily.
      
 0.758
C2CD6
Uncharacterized protein.
   
  
 0.740
SPEM1
Spermatid maturation 1.
      
 0.738
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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