STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERAC1Serine active site containing 1. (654 aa)    
Predicted Functional Partners:
TMEM242
Uncharacterized protein.
      
 0.839
TULP4
TUB like protein 4; Belongs to the TUB family.
      
 0.839
SCAF8
SR-related CTD associated factor 8.
      
 0.838
GTF2H5
General transcription factor IIH subunit 5.
      
 0.749
SPRYD7
SPRY domain containing 7.
      
 0.711
ABITRAM
Actin binding transcription modulator.
   
  
 0.709
NIPAL1
NIPA like domain containing 1.
      
 0.696
NIPAL3
NIPA like domain containing 3.
      
 0.671
PDZD3
PDZ domain containing 3.
      
 0.670
ZACN
Zinc activated ion channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.649
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.