STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABEP1Rabaptin, RAB GTPase binding effector protein 1. (863 aa)    
Predicted Functional Partners:
RABGEF1
Uncharacterized protein.
   
 0.999
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
   
 0.941
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
   
 0.936
GAPVD1
GTPase activating protein and VPS9 domains 1.
   
 0.874
RAB5A
Uncharacterized protein.
   
 0.835
RAB5C
Uncharacterized protein.
   
 0.810
ANKRD27
Ankyrin repeat domain 27.
   
 0.808
RAB4A
RAB4A, member RAS oncogene family.
    
 
 0.778
RAB5B
RAB5B, member RAS oncogene family.
   
 0.775
RAB17
Uncharacterized protein.
    
 0.773
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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