Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MLLT11AF1q. (90 aa)    
Predicted Functional Partners:
CCDC28A
Coiled-coil domain containing 28A.
      
 0.569
WBP1L
WW domain binding protein 1 like.
      
 0.530
TMEM60
Transmembrane protein 60.
      
 0.529
NCOA6
Nuclear receptor coactivator 6.
      
 0.522
CPOX
Coproporphyrinogen oxidase.
      
 0.519
SPATS1
Uncharacterized protein.
      
 0.512
TMEM241
Transmembrane protein 241.
      
 0.485
LRRFIP2
LRR binding FLII interacting protein 2.
      
 0.480
TCF7
Transcription factor 7.
    
 
 0.452
KMT2B
Lysine methyltransferase 2B.
      
 0.445
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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