Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POGZPogo transposable element derived with ZNF domain. (1412 aa)    
Predicted Functional Partners:
CBX5
Chromobox 5.
    
 0.914
PSIP1
PC4 and SFRS1 interacting protein 1.
   
 
 0.862
CHAMP1
Chromosome alignment maintaining phosphoprotein 1.
   
 0.860
CBX1
Uncharacterized protein.
    
 0.847
LOC100341381
Uncharacterized protein.
    
 0.796
MAD2L2
Mitotic arrest deficient 2 like 2.
    
 
 0.784
G1TUI3_RABIT
Uncharacterized protein.
    
 0.762
G1U611_RABIT
Uncharacterized protein.
    
 0.762
G1U996_RABIT
Chromo domain-containing protein.
    
 0.762
CHD4
Uncharacterized protein.
   
 0.723
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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