Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IWS1Interacts with SUPT6H, CTD assembly factor 1. (827 aa)    
Predicted Functional Partners:
SUPT6H
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
   
 0.992
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.943
MLLT3
MLLT3 super elongation complex subunit.
   
 
 0.941
CTDP1
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
   
 
 0.940
EAF1
ELL associated factor 1.
   
 
  0.936
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.932
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.931
SETD2
Uncharacterized protein.
   
 
 0.926
SUPT5H
Transcription elongation factor SPT5.
   
 0.903
AFF4
Uncharacterized protein RA_m002_jsmFBA6Br.
     
 0.898
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (38%) [HD]