STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX2Caudal type homeobox 2. (314 aa)    
Predicted Functional Partners:
SOX17
HMG box domain-containing protein.
    
 
 0.861
POU5F1
POU domain protein.
   
 
 0.850
FOXA2
Forkhead box A2.
   
  
 0.824
FGF4
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.818
EOMES
Eomesodermin.
    
 
 0.791
SOX17-2
Sox C-terminal domain-containing protein.
    
 
 0.769
TEAD4
Tetraspanin.
    
 
 0.768
GCM1
Glial cells missing transcription factor 1.
      
 0.743
ELF5
E74 like ETS transcription factor 5.
      
 0.742
ESRRB
Estrogen related receptor beta.
    
 
 0.732
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.