STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC3H1Ring finger and CCCH-type domains 1. (1134 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.779
ANKRD45
ANK_REP_REGION domain-containing protein.
    
 
 0.723
TMEM260
Transmembrane protein 260.
      
 0.700
TEX50
Testis expressed 50.
      
 0.698
SLC9C2
Solute carrier family 9 member C2 (putative).
      
 0.697
ZBTB37
Zinc finger and BTB domain containing 37.
    
 
 0.663
CNOT3
Uncharacterized protein.
   
 
 0.648
RC3H2
Ring finger and CCCH-type domains 2.
  
 
0.630
CNOT7
Uncharacterized protein.
    
 
 0.629
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 
 0.626
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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