STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PYROXD2Pyridine nucleotide-disulphide oxidoreductase domain 2. (403 aa)    
Predicted Functional Partners:
ENSOCUP00000045772
Uncharacterized protein.
 
     0.950
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.832
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
  
 
 0.801
WDR97
WD_REPEATS_REGION domain-containing protein.
  
 
 0.801
TPD52L2
TPD52 like 2.
      
 0.703
LRCH3
Leucine rich repeats and calponin homology domain containing 3.
      
 0.687
GPD2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.662
BCKDHA
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
     
 0.658
GALE
UDP-galactose-4-epimerase.
     
 0.651
COLEC10
Collectin subfamily member 10.
      
 0.624
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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