STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND10DENN domain containing 10. (414 aa)    
Predicted Functional Partners:
FUOM
Uncharacterized protein.
      
 0.880
VPS26C
VPS26 endosomal protein sorting factor C.
   
 
 0.861
CCDC93
KOG2701 domain-containing protein.
   
 
 0.849
CCDC22
Coiled-coil domain containing 22.
    
 
 0.846
VPS29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.835
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.821
AVL9
AVL9 cell migration associated.
      
 0.815
SRXN1
Sulfiredoxin.
   
 0.812
COMMD1
Copper metabolism domain containing 1.
   
 
 0.802
COMMD5
COMM domain containing 5.
   
 
 0.781
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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