STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF183Ring finger protein 183. (194 aa)    
Predicted Functional Partners:
RNF186
Ring finger protein 186.
   
 
 0.786
RNFT2
Ring finger protein, transmembrane 2.
      
 0.727
RNF175
Ring finger protein 175.
      
 0.727
RNF144A
RBR-type E3 ubiquitin transferase.
    
 0.705
RNF141
Ring finger protein 141.
     
 0.695
RNFT1
Uncharacterized protein.
      
 0.682
RNF150
Ring finger protein 150.
     
 0.647
RNF144B
RBR-type E3 ubiquitin transferase.
   
 0.632
RNF152
Ring finger protein 152.
      
 0.592
RNF19A
RBR-type E3 ubiquitin transferase.
   
 0.589
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.