STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPZ1Uncharacterized protein. (360 aa)    
Predicted Functional Partners:
PREB
Prolactin regulatory element binding.
    
 0.709
CTAGE5
SH3 domain-containing protein.
    
 0.696
FHL5
Four and a half LIM domains 5.
    
 
 0.662
GK2
Glycerol kinase 2; Belongs to the FGGY kinase family.
   
 0.593
LOC100350207
Uncharacterized protein.
   
 0.580
TCHHL1
Trichohyalin like 1.
  
  0.572
SPATC1
Spermatogenesis and centriole associated 1.
      
 0.569
ZFYVE19
Zinc finger FYVE-type containing 19.
    
 
 0.566
CBY2
Spermatid associated.
   
 0.536
NAALAD2
N-acetylated alpha-linked acidic dipeptidase 2.
    
 0.519
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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