HUNK protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HUNK

Hormonally up-regulated Neu-associated kinase. (647 aa)

Predicted Functional Partners:

URB1

0.673

MIS18A

0.620

EVA1C

0.618

PRKAB1

0.604

PRKAB2

0.604

ZBTB21

0.602

PDXK

0.591

SLC44A3

0.542

PRKAG3

0.531

PRKAG2

0.528

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EVA1C	HUNK	ENSOCUP00000046375	ENSOCUP00000004414	Uncharacterized protein.	Hormonally up-regulated Neu-associated kinase.	0.618
EVA1C	PDXK	ENSOCUP00000046375	ENSOCUP00000023513	Uncharacterized protein.	Pyridoxal kinase.	0.491
EVA1C	URB1	ENSOCUP00000046375	ENSOCUP00000008100	Uncharacterized protein.	URB1 ribosome biogenesis homolog.	0.545
HUNK	EVA1C	ENSOCUP00000004414	ENSOCUP00000046375	Hormonally up-regulated Neu-associated kinase.	Uncharacterized protein.	0.618
HUNK	MIS18A	ENSOCUP00000004414	ENSOCUP00000008087	Hormonally up-regulated Neu-associated kinase.	MIS18 kinetochore protein A.	0.620
HUNK	PDXK	ENSOCUP00000004414	ENSOCUP00000023513	Hormonally up-regulated Neu-associated kinase.	Pyridoxal kinase.	0.591
HUNK	PRKAB1	ENSOCUP00000004414	ENSOCUP00000028658	Hormonally up-regulated Neu-associated kinase.	Protein kinase AMP-activated non-catalytic subunit beta 1.	0.604
HUNK	PRKAB2	ENSOCUP00000004414	ENSOCUP00000045892	Hormonally up-regulated Neu-associated kinase.	Protein kinase AMP-activated non-catalytic subunit beta 2.	0.604
HUNK	PRKAG2	ENSOCUP00000004414	ENSOCUP00000005586	Hormonally up-regulated Neu-associated kinase.	Protein kinase AMP-activated non-catalytic subunit gamma 2.	0.528
HUNK	PRKAG3	ENSOCUP00000004414	ENSOCUP00000002935	Hormonally up-regulated Neu-associated kinase.	Protein kinase AMP-activated non-catalytic subunit gamma 3.	0.531
HUNK	SLC44A3	ENSOCUP00000004414	ENSOCUP00000005452	Hormonally up-regulated Neu-associated kinase.	Solute carrier family 44 member 3; Belongs to the CTL (choline transporter-like) family.	0.542
HUNK	URB1	ENSOCUP00000004414	ENSOCUP00000008100	Hormonally up-regulated Neu-associated kinase.	URB1 ribosome biogenesis homolog.	0.673
HUNK	ZBTB21	ENSOCUP00000004414	ENSOCUP00000002835	Hormonally up-regulated Neu-associated kinase.	Zinc finger and BTB domain containing 21.	0.602
MIS18A	HUNK	ENSOCUP00000008087	ENSOCUP00000004414	MIS18 kinetochore protein A.	Hormonally up-regulated Neu-associated kinase.	0.620
MIS18A	PDXK	ENSOCUP00000008087	ENSOCUP00000023513	MIS18 kinetochore protein A.	Pyridoxal kinase.	0.444
MIS18A	URB1	ENSOCUP00000008087	ENSOCUP00000008100	MIS18 kinetochore protein A.	URB1 ribosome biogenesis homolog.	0.741
MIS18A	ZBTB21	ENSOCUP00000008087	ENSOCUP00000002835	MIS18 kinetochore protein A.	Zinc finger and BTB domain containing 21.	0.609
PDXK	EVA1C	ENSOCUP00000023513	ENSOCUP00000046375	Pyridoxal kinase.	Uncharacterized protein.	0.491
PDXK	HUNK	ENSOCUP00000023513	ENSOCUP00000004414	Pyridoxal kinase.	Hormonally up-regulated Neu-associated kinase.	0.591
PDXK	MIS18A	ENSOCUP00000023513	ENSOCUP00000008087	Pyridoxal kinase.	MIS18 kinetochore protein A.	0.444