Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSOCUP00000044803 | G1SN82_RABIT | ENSOCUP00000044803 | ENSOCUP00000004425 | Uncharacterized protein. | ZnMc domain-containing protein. | 0.536 |
ENSOCUP00000044803 | NID2 | ENSOCUP00000044803 | ENSOCUP00000037299 | Uncharacterized protein. | Nidogen 2. | 0.509 |
FURIN | G1SN82_RABIT | ENSOCUP00000029858 | ENSOCUP00000004425 | Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family. | ZnMc domain-containing protein. | 0.452 |
FURIN | MMP8 | ENSOCUP00000029858 | ENSOCUP00000000947 | Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family. | Matrix metallopeptidase 8. | 0.427 |
FURIN | TIMP3 | ENSOCUP00000029858 | ENSOCUP00000007183 | Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family. | Metalloproteinase inhibitor 3; Complexes with metalloproteinases (such as collagenases) and irreversibly inactivates them by binding to their catalytic zinc cofactor. May form part of a tissue-specific acute response to remodeling stimuli (By similarity). | 0.443 |
FURIN | TIMP4 | ENSOCUP00000029858 | ENSOCUP00000013706 | Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family. | Metalloproteinase inhibitor 4; Complexes with metalloproteinases (such as collagenases) and irreversibly inactivates them by binding to their catalytic zinc cofactor; Belongs to the protease inhibitor I35 (TIMP) family. | 0.484 |
G1SN82_RABIT | ENSOCUP00000044803 | ENSOCUP00000004425 | ENSOCUP00000044803 | ZnMc domain-containing protein. | Uncharacterized protein. | 0.536 |
G1SN82_RABIT | FURIN | ENSOCUP00000004425 | ENSOCUP00000029858 | ZnMc domain-containing protein. | Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family. | 0.452 |
G1SN82_RABIT | LOC103348521 | ENSOCUP00000004425 | ENSOCUP00000026817 | ZnMc domain-containing protein. | NTR domain-containing protein. | 0.427 |
G1SN82_RABIT | MMP20 | ENSOCUP00000004425 | ENSOCUP00000002545 | ZnMc domain-containing protein. | Matrix metallopeptidase 20. | 0.425 |
G1SN82_RABIT | MMP8 | ENSOCUP00000004425 | ENSOCUP00000000947 | ZnMc domain-containing protein. | Matrix metallopeptidase 8. | 0.601 |
G1SN82_RABIT | NID1 | ENSOCUP00000004425 | ENSOCUP00000041684 | ZnMc domain-containing protein. | Uncharacterized protein. | 0.536 |
G1SN82_RABIT | NID2 | ENSOCUP00000004425 | ENSOCUP00000037299 | ZnMc domain-containing protein. | Nidogen 2. | 0.446 |
G1SN82_RABIT | TIMP1 | ENSOCUP00000004425 | ENSOCUP00000009228 | ZnMc domain-containing protein. | Metalloproteinase inhibitor 1; Metalloproteinase inhibitor that functions by forming one to one complexes with target metalloproteinases, such as collagenases, and irreversibly inactivates them by binding to their catalytic zinc cofactor. Acts on MMP1, MMP2, MMP3, MMP7, MMP8, MMP9, MMP10, MMP11, MMP12, MMP13 and MMP16. Does not act on MMP14. Also functions as a growth factor that regulates cell differentiation, migration and cell death and activates cellular signaling cascades via CD63 and ITGB1. Plays a role in integrin signaling (By similarity). | 0.591 |
G1SN82_RABIT | TIMP3 | ENSOCUP00000004425 | ENSOCUP00000007183 | ZnMc domain-containing protein. | Metalloproteinase inhibitor 3; Complexes with metalloproteinases (such as collagenases) and irreversibly inactivates them by binding to their catalytic zinc cofactor. May form part of a tissue-specific acute response to remodeling stimuli (By similarity). | 0.765 |
G1SN82_RABIT | TIMP4 | ENSOCUP00000004425 | ENSOCUP00000013706 | ZnMc domain-containing protein. | Metalloproteinase inhibitor 4; Complexes with metalloproteinases (such as collagenases) and irreversibly inactivates them by binding to their catalytic zinc cofactor; Belongs to the protease inhibitor I35 (TIMP) family. | 0.429 |
LOC103348521 | G1SN82_RABIT | ENSOCUP00000026817 | ENSOCUP00000004425 | NTR domain-containing protein. | ZnMc domain-containing protein. | 0.427 |
LOC103348521 | MMP20 | ENSOCUP00000026817 | ENSOCUP00000002545 | NTR domain-containing protein. | Matrix metallopeptidase 20. | 0.418 |
LOC103348521 | MMP8 | ENSOCUP00000026817 | ENSOCUP00000000947 | NTR domain-containing protein. | Matrix metallopeptidase 8. | 0.418 |
MMP20 | G1SN82_RABIT | ENSOCUP00000002545 | ENSOCUP00000004425 | Matrix metallopeptidase 20. | ZnMc domain-containing protein. | 0.425 |
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