N4BP2 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N4BP2

NEDD4 binding protein 2. (1670 aa)

Predicted Functional Partners:

G1U7A6_RABIT

0.851

PDS5A

0.700

NDUFA6

0.697

NDUFS6

0.687

NDUFA2

0.675

NDUFA12

0.674

TMEM156

0.673

NDUFB9

0.665

NDUFA9

0.652

PDE10A

0.650

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G1U7A6_RABIT	N4BP2	ENSOCUP00000025308	ENSOCUP00000004432	Uncharacterized protein.	NEDD4 binding protein 2.	0.851
G1U7A6_RABIT	NDUFA12	ENSOCUP00000025308	ENSOCUP00000038365	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
G1U7A6_RABIT	NDUFA2	ENSOCUP00000025308	ENSOCUP00000003664	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
G1U7A6_RABIT	NDUFA6	ENSOCUP00000025308	ENSOCUP00000013261	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit A6; Belongs to the complex I LYR family.	0.999
G1U7A6_RABIT	NDUFA9	ENSOCUP00000025308	ENSOCUP00000018067	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit A9.	0.999
G1U7A6_RABIT	NDUFB9	ENSOCUP00000025308	ENSOCUP00000019256	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit B9; Belongs to the complex I LYR family.	0.999
G1U7A6_RABIT	NDUFS6	ENSOCUP00000025308	ENSOCUP00000039783	Uncharacterized protein.	zf-CHCC domain-containing protein.	0.999
N4BP2	G1U7A6_RABIT	ENSOCUP00000004432	ENSOCUP00000025308	NEDD4 binding protein 2.	Uncharacterized protein.	0.851
N4BP2	NDUFA12	ENSOCUP00000004432	ENSOCUP00000038365	NEDD4 binding protein 2.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.674
N4BP2	NDUFA2	ENSOCUP00000004432	ENSOCUP00000003664	NEDD4 binding protein 2.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.675
N4BP2	NDUFA6	ENSOCUP00000004432	ENSOCUP00000013261	NEDD4 binding protein 2.	NADH:ubiquinone oxidoreductase subunit A6; Belongs to the complex I LYR family.	0.697
N4BP2	NDUFA9	ENSOCUP00000004432	ENSOCUP00000018067	NEDD4 binding protein 2.	NADH:ubiquinone oxidoreductase subunit A9.	0.652
N4BP2	NDUFB9	ENSOCUP00000004432	ENSOCUP00000019256	NEDD4 binding protein 2.	NADH:ubiquinone oxidoreductase subunit B9; Belongs to the complex I LYR family.	0.665
N4BP2	NDUFS6	ENSOCUP00000004432	ENSOCUP00000039783	NEDD4 binding protein 2.	zf-CHCC domain-containing protein.	0.687
N4BP2	PDE10A	ENSOCUP00000004432	ENSOCUP00000031272	NEDD4 binding protein 2.	Phosphodiesterase.	0.650
N4BP2	PDS5A	ENSOCUP00000004432	ENSOCUP00000043564	NEDD4 binding protein 2.	PDS5 cohesin associated factor A.	0.700
N4BP2	TMEM156	ENSOCUP00000004432	ENSOCUP00000000502	NEDD4 binding protein 2.	Transmembrane protein 156.	0.673
NDUFA12	G1U7A6_RABIT	ENSOCUP00000038365	ENSOCUP00000025308	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.999
NDUFA12	N4BP2	ENSOCUP00000038365	ENSOCUP00000004432	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NEDD4 binding protein 2.	0.674
NDUFA12	NDUFA2	ENSOCUP00000038365	ENSOCUP00000003664	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999