STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM161BTransmembrane protein 161B. (487 aa)    
Predicted Functional Partners:
KBTBD12
Kelch repeat and BTB domain containing 12.
      
 0.619
WDR37
WD repeat domain 37.
   
  
 0.615
UBXN7
UBX domain-containing protein.
   
  
 0.572
LRIG2
Leucine rich repeats and immunoglobulin like domains 2.
   
  
 0.570
TMEM38A
Trimeric intracellular cation channel type A; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores; Belongs to the TMEM38 family.
      
 0.545
SIPA1L1
Signal induced proliferation associated 1 like 1.
   
  
 0.541
HIBADH
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. 3-hydroxyisobutyrate dehydrogenase subfamily.
      
 0.530
HARS1
Histidyl-tRNA synthetase.
   
  
 0.512
MEF2C
Myocyte enhancer factor 2C.
      
 0.511
IMMP2L
Uncharacterized protein.
      
 0.507
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.