STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLCD5TLC domain containing 5. (245 aa)    
Predicted Functional Partners:
POMP
Proteasome maturation protein.
      
 0.818
RBMS3
RNA binding motif single stranded interacting protein 3.
   
  
 0.792
OR11L1
Olfactory receptor.
      
 0.746
AGPAT1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
      
 0.740
SSH3
Slingshot protein phosphatase 3.
   
  
 0.713
LOXL1
Lysyl oxidase like 1.
      
 0.649
SEMA6A
Semaphorin 6A; Belongs to the semaphorin family.
   
  
 0.649
TNIK
TRAF2 and NCK interacting kinase.
      
 0.598
SORBS2
Sorbin and SH3 domain containing 2.
   
  
 0.589
FMN1
Formin 1.
      
 0.581
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.