Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TLCD5TLC domain containing 5. (245 aa)    
Predicted Functional Partners:
POMP
Proteasome maturation protein.
      
 0.834
RBMS3
RNA binding motif single stranded interacting protein 3.
      
 0.777
OR11L1
Olfactory receptor.
      
 0.745
AGPAT1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
      
 0.703
SEMA6A
Semaphorin 6A; Belongs to the semaphorin family.
      
 0.644
SSH3
Slingshot protein phosphatase 3.
      
 0.639
ARHGEF12
Rho guanine nucleotide exchange factor 12.
      
 0.629
LOXL1
Lysyl oxidase like 1.
      
 0.616
FMN1
Formin 1.
      
 0.584
SORBS2
Sorbin and SH3 domain containing 2.
   
  
 0.573
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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