Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TSPAN1Tetraspanin. (241 aa)    
Predicted Functional Partners:
TSPAN31
Tetraspanin 31; Belongs to the tetraspanin (TM4SF) family.
      
 0.548
TSPAN14
Tetraspanin.
      
0.536
STON2
Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.
      
 0.522
CDHR2
Cadherin related family member 2.
     
 0.516
TM4SF1
Transmembrane 4 L six family member 1.
      
 0.492
MPZL2
Myelin protein zero like 2.
   
  
 0.489
TM4SF5
Uncharacterized protein.
      
 0.475
L3HYPDH
Trans-L-3-hydroxyproline dehydratase.
      
 0.453
KCTD18
Potassium channel tetramerization domain containing 18.
      
 0.445
RIPPLY1
Ripply transcriptional repressor 1.
      
 0.434
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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