STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSD2Uncharacterized protein. (475 aa)    
Predicted Functional Partners:
ENSOCUP00000029266
PWWP domain-containing protein.
 
      0.900
H3C13
Histone H3; Belongs to the histone H3 family.
 
 
 0.804
SMYD2
SET and MYND domain containing 2.
   
 
 0.740
G1T4I8_RABIT
Uncharacterized protein.
   
 
 0.739
ENSOCUP00000032761
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.727
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.680
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.680
LOC100345683
Histone H3; Belongs to the histone H3 family.
 
 
 0.678
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.675
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 0.675
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (48%) [HD]