STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF804AZinc finger protein 804A. (1120 aa)    
Predicted Functional Partners:
PDE4B
Phosphodiesterase.
   
 
 0.699
PRSS16
Serine protease 16.
      
 0.668
NRGN
Neurogranin.
      
 0.649
DDX10
RNA helicase.
    
 0.630
PDZD4
PDZ domain containing 4.
      
 0.611
GPATCH4
G-patch domain containing 4.
    
 
 0.600
CTXN3
Cortexin 3.
      
 0.596
UTP6
UTP6 small subunit processome component.
    
 
 0.591
RRP36
Ribosomal RNA processing 36.
   
   0.585
NOM1
Nucleolar protein with MIF4G domain 1.
   
   0.578
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.