Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYB561D2Cytochrome b561 family member D2. (222 aa)    
Predicted Functional Partners:
SLC25A28
Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.680
G1U8Z6_RABIT
ARA70 domain-containing protein.
      
 0.680
CYB561
Cytochrome b561.
      
 0.628
SLC39A8
Solute carrier family 39 member 8.
    
 
 0.562
ZMYND8
Zinc finger MYND-type containing 8.
   
   0.551
NCOA4
Uncharacterized protein.
      
 0.526
INTS5
Integrator complex subunit 5.
   
  0.518
INTS3
Integrator complex subunit 3.
   
   0.510
SLC40A1
Solute carrier family 40 member 1.
      
 0.478
STEAP1
Ferric oxidoreductase domain-containing protein.
      
 0.467
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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