STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM115Transmembrane protein 115. (351 aa)    
Predicted Functional Partners:
MUL1
Mitochondrial E3 ubiquitin protein ligase 1.
   
    0.658
SMUG1
Single-strand-selective monofunctional uracil-DNA glycosylase 1.
      
 0.648
CSNK1D
Casein kinase I isoform delta.
   
  
 0.546
DCTN1
CAP-Gly domain-containing protein.
   
 
  0.522
DCTN3
Dynactin subunit 3.
   
 
  0.519
DCTN2
Dynactin subunit 2.
   
 
  0.517
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
   
  
 0.502
COG2
Component of oligomeric golgi complex 2.
   
 
  0.496
COG1
Component of oligomeric golgi complex 1.
   
 
 0.487
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 
 0.468
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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