Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CIPCCLOCK interacting pacemaker. (391 aa)    
Predicted Functional Partners:
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
 0.928
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.926
NPAS2
Neuronal PAS domain protein 2.
    
 0.863
CLOCK
Clock circadian regulator.
    
 0.863
PASD1
PAS domain-containing protein.
    
 0.793
LOC100345774
Uncharacterized protein.
      
 0.730
PER1
Period circadian regulator 1.
     
 0.691
ZMYM4
Zinc finger MYM-type containing 4.
    
   0.567
LIPC
Hepatic triacylglycerol lipase; Hepatic lipase has the capacity to catalyze hydrolysis of phospholipids, mono-, di-, and triglycerides, and acyl-CoA thioesters. It is an important enzyme in HDL metabolism. Hepatic lipase binds heparin (By similarity).
      
 0.558
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2.
    
 0.510
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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