STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JAGN1Jagunal homolog 1. (183 aa)    
Predicted Functional Partners:
GNB1L
G protein subunit beta 1 like.
      
 0.820
FAM189B
Family with sequence similarity 189 member B.
   
  
 0.676
ITM2B
Integral membrane protein 2B.
      
 0.643
SYNRG
Synergin gamma.
   
  
 0.618
VPS13B
Vacuolar protein sorting 13 homolog B.
      
 0.617
DNAJC21
DnaJ heat shock protein family (Hsp40) member C21.
   
  
 0.603
CYP20A1
Cytochrome P450 family 20 subfamily A member 1.
      
 0.568
SLC37A4
Solute carrier family 37 member 4.
      
 0.555
SYNPR
Synaptoporin.
      
 0.544
GPR37
G protein-coupled receptor 37.
   
  
 0.540
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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