STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT13Synaptotagmin 13. (425 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
     
 0.656
KLHL29
Kelch like family member 29.
   
  
 0.645
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.540
STXBP3
Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.538
PDZD11
PDZ domain-containing protein.
     
 0.529
DIRAS2
DIRAS family GTPase 2.
   
  
 0.517
UNC13B
Uncharacterized protein.
   
 
 0.515
ESYT2
Extended synaptotagmin 2.
     
 0.514
FRMD8
FERM domain containing 8.
      
 0.497
KCNK16
Potassium two pore domain channel subfamily K member 16; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.472
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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