STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STK40Serine/threonine kinase 40. (435 aa)    
Predicted Functional Partners:
VAC14
VAC14 component of PIKFYVE complex.
   
 
 0.756
COP1
COP1 E3 ubiquitin ligase.
    
 
 0.743
DNAJB4
DnaJ heat shock protein family (Hsp40) member B4.
   
 
 0.742
OR52N2
Olfactory receptor.
    
 
 0.724
YARS1
Tyrosine--tRNA ligase.
   
  
 0.722
TRIB1
Tribbles pseudokinase 1.
    
 
0.715
PPP6C
Serine/threonine-protein phosphatase.
   
 
 0.699
DET1
Uncharacterized protein.
    
 
 0.699
SOAT1
O-acyltransferase.
      
 0.695
KPNA6
Importin subunit alpha; Functions in nuclear protein import.
   
  
 0.689
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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