STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBP2Uncharacterized protein. (348 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
   
 
 0.956
LMO2
LIM domain only 2.
    
 
 0.707
NABP1
Uncharacterized protein.
    
 
 0.692
LDB2
LIM domain binding 2.
   
 
 0.691
ISL1
ISL LIM homeobox 1.
    
 
 0.634
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 
 0.629
LMO3
LIM domain only 3.
    
 
 0.623
SSBP3
Single stranded DNA binding protein 3.
  
 
 
0.617
ZFYVE16
Zinc finger FYVE domain-containing protein.
      
 0.608
ZFP90
ZFP90 zinc finger protein.
      
 0.595
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.