Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SF3A3Splicing factor 3a subunit 3. (501 aa)    
Predicted Functional Partners:
SF3A1
Splicing factor 3a subunit 1.
   
 0.999
SF3B3
Splicing factor 3b subunit 3.
   
 0.996
SF3B4
Splicing factor 3b subunit 4.
   
 0.990
SNRPB2
Small nuclear ribonucleoprotein polypeptide B2.
   
 0.989
SF3B2
Splicing factor 3b subunit 2.
   
 0.987
RBM17
RRM_1 domain-containing protein.
   
 0.987
PHF5A
PHD finger protein 5A.
   
 0.983
SF3B5
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.979
SNRPA1
LRRcap domain-containing protein.
   
 0.977
DHX15
DEAH-box helicase 15.
   
 0.974
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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