Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMPRSS11BTransmembrane serine protease 11B. (404 aa)    
Predicted Functional Partners:
TMPRSS4
Transmembrane serine protease 4; Belongs to the peptidase S1 family.
  
 
0.624
KRT78
Keratin 78; Belongs to the intermediate filament family.
   
 0.586
CRNN
Cornulin.
   
 0.578
G1TH80_RABIT
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
  0.569
LOC100353613
VWFA domain-containing protein.
    
 0.539
CNFN
Cornifelin.
   
 
 0.530
G1TX71_RABIT
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
     0.517
CMA1
Chymase; Major secreted protease of mast cells with suspected roles in vasoactive peptide generation, extracellular matrix degradation, and regulation of gland secretion.
  
     0.515
LOC100340108
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
    0.512
SPINK5
Serine peptidase inhibitor, Kazal type 5.
   
 0.483
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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