STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPA6Carboxypeptidase A6. (438 aa)    
Predicted Functional Partners:
GRK4
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
   
    0.612
CHD7
Chromodomain helicase DNA binding protein 7.
    
 
 0.568
CPN1
Carboxypeptidase N subunit 1.
  
 
 0.539
LOC100349163
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.526
PRCP
Prolylcarboxypeptidase.
   
  
 0.496
CEL
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
  
 0.483
CTRL
Chymotrypsin like; Belongs to the peptidase S1 family.
   
 
 0.452
GRM8
Glutamate metabotropic receptor 8.
   
  
 0.447
AGT
Angiotensinogen; Belongs to the serpin family.
   
 
  0.440
C5
Complement C5.
   
 0.439
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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