Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR48WD repeat domain 48. (867 aa)    
Predicted Functional Partners:
USP1
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 0.998
USP46
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 0.993
USP12
Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family.
    
 0.993
WDR20
WD repeat domain 20.
    
 0.981
ENSOCUP00000036564
WD_REPEATS_REGION domain-containing protein.
    
 0.960
PHLPP1
PH domain and leucine rich repeat protein phosphatase 1.
   
 
 0.929
FANCI
FA complementation group I.
    
 0.919
FANCL
FA complementation group L.
     
 0.919
ATAD5
ATPase family AAA domain containing 5.
   
 0.905
FANCD2
Uncharacterized protein.
    
 0.888
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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