Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKIRIN1Uncharacterized protein. (191 aa)    
Predicted Functional Partners:
AKIRIN2
Akirin 2.
   
   0.751
HDGFL1
Uncharacterized protein.
      
 0.687
WDR13
WD repeat domain 13.
      
 0.560
PSMA5
Proteasome subunit alpha type.
   
   0.531
PLAAT2
Phospholipase A and acyltransferase 2.
      
 0.511
MPLKIP
M-phase specific PLK1 interacting protein.
      
 0.510
FRMD5
FERM domain containing 5.
      
 0.475
KPNA6
Importin subunit alpha; Functions in nuclear protein import.
   
 
 0.435
PCBD2
Uncharacterized protein.
      
 0.435
RELL2
RELT like 2.
      
 0.429
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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