Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYMPKSymplekin. (990 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.999
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.999
WDR33
WD repeat domain 33.
    
 0.998
FIP1L1
Fip1 domain-containing protein.
   
 0.993
CPSF4
Cleavage and polyadenylation specific factor 4.
   
 0.991
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.990
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.990
CPSF4L
Cleavage and polyadenylation specific factor 4 like.
   
 0.976
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.975
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 0.967
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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