STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1SP45_RABITCalponin-homology (CH) domain-containing protein. (243 aa)    
Predicted Functional Partners:
EFHB
EF-hand domain family member B.
   
   0.581
WDR1
WD repeat domain 1.
   
 
 0.534
C3orf67
Chromosome 3 open reading frame 67.
    
 
 0.523
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.523
EFHC2
EF-hand domain containing 2.
   
 
 0.499
EFHC1
EF-hand domain containing 1.
   
 
 0.499
PLS1
Plastin 1.
   
 
 0.463
LCP1
Lymphocyte cytosolic protein 1.
   
 
 0.463
PLS3
Plastin 3.
   
 
 0.463
PACRGL
Uncharacterized protein.
    
 
 0.458
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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