GNAT2 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNGB3	GNAT2	ENSOCUP00000015434	ENSOCUP00000004824	Cyclic nucleotide gated channel subunit beta 3.	G protein subunit alpha transducin 2.	0.946
CNGB3	GNAT3	ENSOCUP00000015434	ENSOCUP00000022632	Cyclic nucleotide gated channel subunit beta 3.	G protein subunit alpha transducin 3.	0.421
CNGB3	GNB1	ENSOCUP00000015434	ENSOCUP00000008676	Cyclic nucleotide gated channel subunit beta 3.	G protein subunit beta 1.	0.578
CNGB3	GNB3	ENSOCUP00000015434	ENSOCUP00000011129	Cyclic nucleotide gated channel subunit beta 3.	G protein subunit beta 3.	0.673
CNGB3	GNB4	ENSOCUP00000015434	ENSOCUP00000000803	Cyclic nucleotide gated channel subunit beta 3.	G protein subunit beta 4.	0.454
CNGB3	GNGT1	ENSOCUP00000015434	ENSOCUP00000014636	Cyclic nucleotide gated channel subunit beta 3.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.727
CNGB3	PDE6A	ENSOCUP00000015434	ENSOCUP00000011919	Cyclic nucleotide gated channel subunit beta 3.	Phosphodiesterase.	0.778
CNGB3	PDE6C	ENSOCUP00000015434	ENSOCUP00000009077	Cyclic nucleotide gated channel subunit beta 3.	Phosphodiesterase.	0.945
CNGB3	PDE6H	ENSOCUP00000015434	ENSOCUP00000034198	Cyclic nucleotide gated channel subunit beta 3.	Phosphodiesterase 6H.	0.884
CNGB3	RHO	ENSOCUP00000015434	ENSOCUP00000011220	Cyclic nucleotide gated channel subunit beta 3.	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by the arrestin SAG and terminates signaling (By similarity).	0.715
GNAT2	CNGB3	ENSOCUP00000004824	ENSOCUP00000015434	G protein subunit alpha transducin 2.	Cyclic nucleotide gated channel subunit beta 3.	0.946
GNAT2	GNAT3	ENSOCUP00000004824	ENSOCUP00000022632	G protein subunit alpha transducin 2.	G protein subunit alpha transducin 3.	0.981
GNAT2	GNB1	ENSOCUP00000004824	ENSOCUP00000008676	G protein subunit alpha transducin 2.	G protein subunit beta 1.	0.980
GNAT2	GNB3	ENSOCUP00000004824	ENSOCUP00000011129	G protein subunit alpha transducin 2.	G protein subunit beta 3.	0.977
GNAT2	GNB4	ENSOCUP00000004824	ENSOCUP00000000803	G protein subunit alpha transducin 2.	G protein subunit beta 4.	0.970
GNAT2	GNGT1	ENSOCUP00000004824	ENSOCUP00000014636	G protein subunit alpha transducin 2.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.975
GNAT2	PDE6A	ENSOCUP00000004824	ENSOCUP00000011919	G protein subunit alpha transducin 2.	Phosphodiesterase.	0.948
GNAT2	PDE6C	ENSOCUP00000004824	ENSOCUP00000009077	G protein subunit alpha transducin 2.	Phosphodiesterase.	0.957
GNAT2	PDE6H	ENSOCUP00000004824	ENSOCUP00000034198	G protein subunit alpha transducin 2.	Phosphodiesterase 6H.	0.962
GNAT2	RHO	ENSOCUP00000004824	ENSOCUP00000011220	G protein subunit alpha transducin 2.	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by the arrestin SAG and terminates signaling (By similarity).	0.994