Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
P3H1Prolyl 3-hydroxylase 1. (773 aa)    
Predicted Functional Partners:
PPIB
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.965
CRTAP
Cartilage associated protein.
   
0.956
P3H4
Prolyl 3-hydroxylase family member 4 (non-enzymatic).
   
0.955
COL1A2
Collagen alpha-2(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen); Belongs to the fibrillar collagen family.
   
 0.838
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 
 0.818
FKBP10
Peptidylprolyl isomerase.
   
  
 0.782
P4HA2
Prolyl 4-hydroxylase subunit alpha 2.
   
  
 0.761
NUDCD1
NudC domain containing 1.
    
   0.745
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 
 0.737
P4HA1
Prolyl 4-hydroxylase subunit alpha 1.
   
  
 0.693
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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