STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM67Tripartite motif containing 67. (778 aa)    
Predicted Functional Partners:
SNAP47
Synaptosome associated protein 47.
   
 
 0.702
MYO16
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.668
NSG2
Neuronal vesicle trafficking associated 2.
   
  
 0.631
CPLX2
Complexin 2.
   
  
 0.591
TRIM4
Tripartite motif containing 4.
   
 
 0.567
VASP
WH1 domain-containing protein.
    
 
 0.541
FBXW11
F-box and WD repeat domain containing 11.
    
 0.523
EFHD2
EF-hand domain family member D2.
      
 0.507
SIPA1L1
Signal induced proliferation associated 1 like 1.
   
 
 0.503
TRIM66
Tripartite motif containing 66.
   
 
 0.500
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.