STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZRN4PDZ domain containing ring finger 4. (715 aa)    
Predicted Functional Partners:
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.812
ANKDD1A
Ankyrin repeat and death domain containing 1A.
    
 0.750
LRRC1
Leucine rich repeat containing 1.
    
 0.686
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.651
TMEM217
Uncharacterized protein.
      
 0.648
TMEM217-2
Uncharacterized protein.
      
 0.648
G1SI52_RABIT
Protein kinase domain-containing protein.
   
 0.638
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.610
CCDC136
Coiled-coil domain containing 136.
   
 0.597
CERCAM
Uncharacterized protein.
   
  
 0.597
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.