STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP12Ribosomal RNA processing 12 homolog. (1293 aa)    
Predicted Functional Partners:
TSR1
TSR1 ribosome maturation factor.
   
 
 0.999
NOC4L
Nucleolar complex associated 4 homolog.
   
 
 0.997
NOP14
NOP14 nucleolar protein.
   
 
 0.997
KRR1
KRR1 small subunit processome component homolog.
   
 
 0.997
NOP58
NOP58 ribonucleoprotein.
   
 
 0.993
RIOK2
RIO kinase 2.
   
 
 0.988
LTV1
LTV1 ribosome biogenesis factor.
   
 
 0.988
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.987
UTP20
UTP20 small subunit processome component.
   
 
 0.978
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 
 0.967
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.