STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM3PDZ and LIM domain 3. (363 aa)    
Predicted Functional Partners:
ACTN2
Actinin alpha 2.
   
 
 0.809
CSRP3
Cysteine and glycine rich protein 3.
   
  
 0.699
FLNC
Filamin C.
   
 
 0.687
CTNNA3
Catenin alpha 3.
   
 0.682
SORBS2
Sorbin and SH3 domain containing 2.
 
  
 0.663
MYOZ2
Myozenin 2.
   
 
 0.661
SCN8A
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
  
 0.639
NEBL
Nebulette.
  
  
 0.636
KCNC2
Potassium voltage-gated channel subfamily C member 2; Belongs to the potassium channel family.
   
  
 0.628
MYL3
Myosin light chain 3.
   
 0.605
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.