ILDR2 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ILDR2

IG domain-containing protein. (335 aa)

Predicted Functional Partners:

CCSER2

0.624

APOB

0.593

ZC3H12D

0.575

DNAJC24

0.484

SPATA9

0.483

LRIT3

0.481

FCAMR

0.464

LRIT1

0.454

WFIKKN2

0.442

OAF

0.440

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOB	ILDR2	ENSOCUP00000004631	ENSOCUP00000005060	Apolipoprotein B; Apolipoprotein B is a major protein constituent of chylomicrons (apo B-48), LDL (apo B-100) and VLDL (apo B-100). Apo B- 100 functions as a recognition signal for the cellular binding and internalization of LDL particles by the apoB/E receptor.	IG domain-containing protein.	0.593
CCSER2	ILDR2	ENSOCUP00000020593	ENSOCUP00000005060	Coiled-coil serine rich protein 2.	IG domain-containing protein.	0.624
DNAJC24	ILDR2	ENSOCUP00000023534	ENSOCUP00000005060	DnaJ heat shock protein family (Hsp40) member C24.	IG domain-containing protein.	0.484
DNAJC24	OAF	ENSOCUP00000023534	ENSOCUP00000019493	DnaJ heat shock protein family (Hsp40) member C24.	Out at first homolog.	0.569
FCAMR	ILDR2	ENSOCUP00000029752	ENSOCUP00000005060	Uncharacterized protein.	IG domain-containing protein.	0.464
FCAMR	SPATA9	ENSOCUP00000029752	ENSOCUP00000024636	Uncharacterized protein.	Spermatogenesis associated 9.	0.556
ILDR2	APOB	ENSOCUP00000005060	ENSOCUP00000004631	IG domain-containing protein.	Apolipoprotein B; Apolipoprotein B is a major protein constituent of chylomicrons (apo B-48), LDL (apo B-100) and VLDL (apo B-100). Apo B- 100 functions as a recognition signal for the cellular binding and internalization of LDL particles by the apoB/E receptor.	0.593
ILDR2	CCSER2	ENSOCUP00000005060	ENSOCUP00000020593	IG domain-containing protein.	Coiled-coil serine rich protein 2.	0.624
ILDR2	DNAJC24	ENSOCUP00000005060	ENSOCUP00000023534	IG domain-containing protein.	DnaJ heat shock protein family (Hsp40) member C24.	0.484
ILDR2	FCAMR	ENSOCUP00000005060	ENSOCUP00000029752	IG domain-containing protein.	Uncharacterized protein.	0.464
ILDR2	LRIT1	ENSOCUP00000005060	ENSOCUP00000035234	IG domain-containing protein.	Leucine rich repeat, Ig-like and transmembrane domains 1.	0.454
ILDR2	LRIT3	ENSOCUP00000005060	ENSOCUP00000003394	IG domain-containing protein.	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.481
ILDR2	OAF	ENSOCUP00000005060	ENSOCUP00000019493	IG domain-containing protein.	Out at first homolog.	0.440
ILDR2	SPATA9	ENSOCUP00000005060	ENSOCUP00000024636	IG domain-containing protein.	Spermatogenesis associated 9.	0.483
ILDR2	WFIKKN2	ENSOCUP00000005060	ENSOCUP00000000344	IG domain-containing protein.	WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2.	0.442
ILDR2	ZC3H12D	ENSOCUP00000005060	ENSOCUP00000006649	IG domain-containing protein.	Uncharacterized protein.	0.575
LRIT1	ILDR2	ENSOCUP00000035234	ENSOCUP00000005060	Leucine rich repeat, Ig-like and transmembrane domains 1.	IG domain-containing protein.	0.454
LRIT1	LRIT3	ENSOCUP00000035234	ENSOCUP00000003394	Leucine rich repeat, Ig-like and transmembrane domains 1.	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.453
LRIT1	WFIKKN2	ENSOCUP00000035234	ENSOCUP00000000344	Leucine rich repeat, Ig-like and transmembrane domains 1.	WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2.	0.434
LRIT3	ILDR2	ENSOCUP00000003394	ENSOCUP00000005060	Leucine rich repeat, Ig-like and transmembrane domains 3.	IG domain-containing protein.	0.481